Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927387.1_cds_XP_016475212.1_67167
CDS Infomation

[gene=LOC107796900] [db_xref=GeneID:107796900] [protein=pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like] [protein_id=XP_016475212.1] [location=38462..39970] [gbkey=CDS]
Sequence

ATGCGTAAAGGCTTAGTTTTGGATAAATATACGTACCCTCTTGTTCTTAACGCATGTGTA
CAGTTACGTGAGCTCAGACATGGCAGATCGGTTCATTCCCATGCGATAAAAACTGGGTTT
GCGTTGGATTTGTATGTGATGAACAATTTGATTCGTCTGTATGGTGTTTGTGGGTGTGTT
GGGAGTGTTAGGAAGGTGTTCGATAGAAGTCCTGAGAGAGATTTGGTATCTTGGACTACT
TTGATTCAGGGGTATGTGGACAACGGGCATTTGAAGGAAGGAGTTGAGTTGTTCTTTGAA
ATGATTGAACATGGATTAAGGGCTGACGAAAGGATGATGGTCGTTGTGATATCTAGTTGT
GCTAAATTAGGGGATTTGAGATTGGGCCAGAAGTTACACAAATATGTGCAGGGTCATAAG
TTAAATTTTGATGTGTTTCTTGGGAATGCATTGGTGGATATGTACATAAAATGTGGTGAA
ACCGATATTGCTCTTAATGTTTTCCGAGAGATGCCAACGAGAAATGTGATCTCTTGGAAT
ACATTAATATCTGGATTGGCTCAGAGAAGGGAGTTTAAACAGGCCTTGAGTGCATTTAAT
GAAATGCAGGATCAAGGAGTAAAGCCTGATGAGAACACTTTAGTTGGTGTTCTGAATTCC
TGCAGCAATTTAGGGGCACTAGAAGTTGGGAAATGGGTGCACACATATATAGACCGAAAT
CAGATTCAAGTAGCAGGGTATGTTGGCAACGCGCTTGTAGATATGTATGCAAAGAGTGGA
AGCATGGACGACGCCCTTAGAGTTTTCGGAAGTATGAATACTAAAGATGTTTATTCATAC
ACATCTGTGATAGTTGGGTTGGCCACACATGGTAAGGCGCGGATAGCACTTAATTTCTTC
TATAAGATGCTCGCAATTGGCATACAACCAAATGGGGTCACTTTCGTGGGTGTTCTCACA
GCTTGTAGTCACGGAGGATTGGTGGAAGAGGGCCATAAGCTTTTTGCAGATATGTGGAGA
GTGCACAAATTAACACCTCAAATAGAGCATTATGGCTGTATGGTTGATCTGTTGAGTCGT
GCAGGGTTGGTAGATGAAGCAGTAGAGTTCGTGGAAAACATGCCAATTGAACCGGATGCT
TCTATTTGGGGATCAGTATTAGCAGCATGCAGGATCCAAGGAAGAGTTGAACTCGCTGAG
CATGTGACTGAAAAACTTGTCAATATAGAGTCTGAAAAAGACGGTACATACATACTGATG
TCAAACACATATGCTTCAGTCAGTAAATGGAGAGACGCTTTAAAAGTAAGAAGGGCAATG
AAGAAACGGAAAATAAAGAAAGTTCCGGGATGTAGCTCCATTGAACTTGATGGCGTGGTT
TCTGAATTTAGGAAGGGTGACAAAGCGCATCCAAGAAGTAAAGACATATATGCGACAGTT
GAGCAACTGAAACTTCATTCAATTGGTACAGAGGCCTTCTCAAACGGAAATGAGCCCCTC
ATAGTTTGA

Peptide Sequence

PEP ID

XP_016475212.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Nicotiana tabacum]
Sequence

MRKGLVLDKYTYPLVLNACVQLRELRHGRSVHSHAIKTGFALDLYVMNNLIRLYGVCGCV
GSVRKVFDRSPERDLVSWTTLIQGYVDNGHLKEGVELFFEMIEHGLRADERMMVVVISSC
AKLGDLRLGQKLHKYVQGHKLNFDVFLGNALVDMYIKCGETDIALNVFREMPTRNVISWN
TLISGLAQRREFKQALSAFNEMQDQGVKPDENTLVGVLNSCSNLGALEVGKWVHTYIDRN
QIQVAGYVGNALVDMYAKSGSMDDALRVFGSMNTKDVYSYTSVIVGLATHGKARIALNFF
YKMLAIGIQPNGVTFVGVLTACSHGGLVEEGHKLFADMWRVHKLTPQIEHYGCMVDLLSR
AGLVDEAVEFVENMPIEPDASIWGSVLAACRIQGRVELAEHVTEKLVNIESEKDGTYILM
SNTYASVSKWRDALKVRRAMKKRKIKKVPGCSSIELDGVVSEFRKGDKAHPRSKDIYATV
EQLKLHSIGTEAFSNGNEPLIV

Transcript Sequence

Gene sequence data has not been registered.